FICHA · AUR

python-pysam

Python interface for the SAM/BAM sequence alignment and mapping format

  • SAM BAM genomics library
  • LIBRARY
  • SCIENCE
  • PRIVACY
  • Dependency only
official+codex · reviewed · Jun 3, 2026 description in en

Description

SAM and BAM sequence-alignment files can be read, written, and indexed from Python. Bioinformatics researchers use pysam for genomics pipelines, variant analysis, read filtering, and mapping workflows. Genomic data can identify people and requires strict privacy controls.

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