FICHA · AUR

cd-hit

clustering DNA/protein sequence database at high identity with tolerance

  • cli-tool
  • CLI
  • Launchable
  • Runs in terminal
official+codex · reviewed · May 30, 2026 description in en

Description

Clusters DNA and protein sequence databases by high sequence identity. It is useful for bioinformatics researchers who need to reduce redundancy or group similar biological sequences before analysis.

This is a scientific command-line tool. Results depend on thresholds, input quality, and biological context, so verify parameters before using clusters for research conclusions.

How to run

cd-hit

Commands: cd-hit

Permissions

Permissions not analysed for this source yet.