FICHA · AUR

biobambam

BAM file pre-processing utilities for bioinformatics.

  • bioinformatics-bam-tools
  • CLI
  • SCIENCE
  • DATA
  • Launchable
  • Runs in terminal
official+codex · reviewed · May 30, 2026 description in en

Description

BAM alignment files can be preprocessed for bioinformatics workflows with specialized command-line utilities. It is useful for researchers preparing sequencing data for analysis pipelines.

Sequencing files are large and can represent sensitive biological data. Keep originals, verify pipeline steps, and protect access to human or private datasets.

How to run

bammarkduplicates

Commands: bammarkduplicates

Permissions

Permissions not analysed for this source yet.